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Contact



Programming Languages

Expertise: R and Rstudio, Perl, Bash
Familiarity: Git, python, php, HTML, C, SQL


Languages

Spanish - Native
English - B2 (TOEFL-IBT)
German - A2

Disclaimer

Made with the R package pagedown.

The source code is available on github.com/nstrayer/cv.

Last updated on 2022-07-20.

Main

Mónica Padilla Gálvez

Undergraduate Student of Genomic Sciences with interest in studying gene regulation, evolution and pathogens using bioinformatics.

Education

B.Sc.,Genomic Sciences

National School of Superior Studies (ENES) Juriquilla, National Autonomous University of Mexico (UNAM)

Querétaro, México

present - 2018

Research Experience

Undergraduate Thesis Student

RegGenoLab, International Laboratory for Human Genome Research (LIIGH), National Autonomous University of Mexico (UNAM)

Querétaro, México

present - 2020

  • Dr. Alejandra Medina-Rivera
  • Identification and characterization of the gene regulatory networks that module the transcriptional response to SARS-CoV-2 infection in humans

Undergraduate Visiting Student

Cancer Research Center (CiC), University of Salamanca

Salamanca, España

2021

  • Dr. Javier De-Las-Rivas
  • Integration pipeline of multiple RNA-seq datasets and gene regulatory network analysis

Undergraduate Student

RegGenoLab, International Laboratory for Human Genome Research (LIIGH), National Autonomous University of Mexico (UNAM)

Querétaro, México

2020 - 2018

  • Dr. Alejandra Medina-Rivera
  • Development of bioinformatic pipeline to construct and compare regulatory networks within RSAT: network-interactions
  • Maintainance of motif databases and REST-API in RSAT

High School Intern

RegGenoLab, International Laboratory for Human Genome Research (LIIGH), National Autonomous University of Mexico (UNAM)

Querétaro, México

2018 - 2017

  • Dr. Alejandra Medina-Rivera
  • Standarization of ChIP-seq technique in PBMCs




Teaching Experience

Lecturer in Bioinformatics II: Transcriptomics

Genomic Sciences Program

Querétaro, México

2022

  • Lectured on RNA-seq for DE Analysis Pipeline

Assistant in the International Workshop of Bioinformatics (TIB 2021)

N/A

Virtual

2021

  • Main instructor: Dr. Leonardo Collado-Torres
  • Single cell transcriptomic (scRNA-seq) data analysis with R and Bioconductor

Publications

RSAT 2022: regulatory sequence analysis tools.

N/A

N/A

2022

  • Santana-Garcia, W., Castro-Mondragon, J., Padilla-Gálvez, M., Nguyen, N., Elizondo-Salas, A., Ksouri, N., Gerbes, F., Thieffry, D., Vincens, P., Contreras-Moreira, B., van Helden, J., Thomas-Chollier, M. & Medina-Rivera, A. (2022). RSAT 2022: regulatory sequence analysis tools. Nucleic Acids Research.

Talks and Posters

ISMB 2022

Poster

Virtual

2022

  • Identifying the regulatory networks that module the transcriptional responses to SARS-CoV-2 infection in humans.

RiaBio 2021

Talk

Salamanca, España

2021

  • Uncovering the regulatory network that modules the transcriptional response to SARS-CoV-2 infection in humans

ISCB-LA SoIBio BioNetMX Symposium 2020

Poster

Virtual

2020

  • network-interactions: Assessment of TF-gene predicted interactions in gene regulatory networks

Courses

Introduction to the logical modeling of cellular networks, with applications to cancer and immunology

International Laboratory for Human Genome Research (LIIGH)

Virtual

2021

  • Main instructor: Dr. Denis Thieffry (ENS, Paris)

International Workshop of Bioinformatics (TIB 2020)

N/A

Virtual

2020

  • Main instructor: Dr. Leonardo Collado-Torres
  • Single cell transcriptomic (scRNA-seq) data analysis with R and Bioconductor

ISCB-LA SoIBio BioNetMX Symposium 2020

N/A

Virtual

2020

  • Main instructor: Dr. Daniel Blanco-Melo
  • Virus Discovery and Phylogenetics Workshop

2nd Women in Bioinformatics and Data Science LA

N/A

Virtual

2020

  • Main instructor: Maryam Chaib
  • Phylogenetic Orthology Inference for Comparative Genomics